.. DO NOT EDIT. .. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY. .. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE: .. "auto_examples/qpf_hk.py" .. LINE NUMBERS ARE GIVEN BELOW. .. only:: html .. note:: :class: sphx-glr-download-link-note Click :ref:`here ` to download the full example code .. rst-class:: sphx-glr-example-title .. _sphx_glr_auto_examples_qpf_hk.py: QPF (Hong Kong) ======================================================== This example demonstrates how to perform operational deterministic QPF up to three hours from raingauge and radar data, using data from Hong Kong. .. GENERATED FROM PYTHON SOURCE LINES 10-13 Definitions -------------------------------------------------------- .. GENERATED FROM PYTHON SOURCE LINES 13-40 .. code-block:: default import os import numpy as np import pandas as pd import xarray as xr import cartopy.feature as cfeature import cartopy.crs as ccrs import cartopy.io.shapereader as shpreader import matplotlib.pyplot as plt from matplotlib.colors import BoundaryNorm, ListedColormap from pyresample import utils from swirlspy.rad.iris import read_iris_grid from swirlspy.qpe.utils import locate_file, timestamps_ending from swirlspy.qpf import rover from swirlspy.qpf import sla from swirlspy.utils import standardize_attr, FrameType from swirlspy.utils.conversion import to_rainfall_depth, acc_rainfall_depth from swirlspy.core.resample import grid_resample plt.switch_backend('agg') THIS_DIR = os.getcwd() os.chdir(THIS_DIR) start_time = pd.Timestamp.now() .. GENERATED FROM PYTHON SOURCE LINES 41-49 Initialising --------------------------------------------------- This section demonstrates extracting radar reflectivity data. Step 1: Define a basetime. .. GENERATED FROM PYTHON SOURCE LINES 49-53 .. code-block:: default # Supply basetime basetime = pd.Timestamp('201902190800') .. GENERATED FROM PYTHON SOURCE LINES 54-56 Step 2: Using basetime, generate timestamps of desired radar files timestamps_ending() and locate files using locate_file(). .. GENERATED FROM PYTHON SOURCE LINES 56-67 .. code-block:: default # Obtain radar files dir = THIS_DIR + '/../tests/samples/iris/ppi' located_files = [] radar_ts = timestamps_ending( basetime, duration=pd.Timedelta(60, 'm') ) for timestamp in radar_ts: located_files.append(locate_file(dir, timestamp)) .. GENERATED FROM PYTHON SOURCE LINES 68-71 Step 3: Read data from radar files into xarray.DataArray using read_iris_grid(). .. GENERATED FROM PYTHON SOURCE LINES 71-79 .. code-block:: default reflectivity_list = [] # stores reflec from read_iris_grid() for filename in located_files: reflec = read_iris_grid( filename ) reflectivity_list.append(reflec) .. rst-class:: sphx-glr-script-out .. code-block:: pytb Traceback (most recent call last): File "/tmp/build/docs/swirlspy/swirlspy/examples/qpf_hk.py", line 75, in filename File "/tmp/build/docs/swirlspy/swirlspy/rad/_iris.py", line 407, in read_iris_grid raise ValueError("Invalid file") from e ValueError: Invalid file .. GENERATED FROM PYTHON SOURCE LINES 80-81 Step 4: Define the target grid as a pyresample AreaDefinition. .. GENERATED FROM PYTHON SOURCE LINES 81-102 .. code-block:: default # Defining target grid area_id = "hk1980_250km" description = ("A 1km resolution rectangular grid " "centred at HKO and extending to 250 km " "in each direction in HK1980 easting/northing coordinates") proj_id = 'hk1980' projection = ('+proj=tmerc +lat_0=22.31213333333334 ' '+lon_0=114.1785555555556 +k=1 +x_0=836694.05 ' '+y_0=819069.8 +ellps=intl +towgs84=-162.619,-276.959,' '-161.764,0.067753,-2.24365,-1.15883,-1.09425 +units=m ' '+no_defs') x_size = 500 y_size = 500 area_extent = (587000, 569000, 1087000, 1069000) area_def_tgt = utils.get_area_def( area_id, description, proj_id, projection, x_size, y_size, area_extent ) .. GENERATED FROM PYTHON SOURCE LINES 103-106 Step 5: Reproject the radar data from read_iris_grid() from Centered Azimuthal (source) projection to HK 1980 (target) projection. .. GENERATED FROM PYTHON SOURCE LINES 106-119 .. code-block:: default # Extracting the AreaDefinition of the source projection area_def_src = reflectivity_list[0].attrs['area_def'] # Reprojecting reproj_reflectivity_list = [] for reflec in reflectivity_list: reproj_reflec = grid_resample( reflec, area_def_src, area_def_tgt, coord_label=['easting', 'northing'] ) reproj_reflectivity_list.append(reproj_reflec) .. GENERATED FROM PYTHON SOURCE LINES 120-122 Step 6: Assigning reflectivity xarrays at the last two timestamps to variables for use during ROVER QPF. .. GENERATED FROM PYTHON SOURCE LINES 122-125 .. code-block:: default initialising_time = pd.Timestamp.now() .. GENERATED FROM PYTHON SOURCE LINES 126-132 Running ROVER and Semi-Lagrangian Advection ------------------------------------------- 1. Concatenate two reflectivity xarrays along time dimension. 2. Run ROVER, with the concatenated xarray as the input. 3. Perform Semi-Lagrangian Advection using the motion fields from rover. .. GENERATED FROM PYTHON SOURCE LINES 132-151 .. code-block:: default # Combining the two reflectivity DataArrays # the order of the coordinate keys is now ['y', 'x', 'time'] # as opposed to ['time', 'x', 'y'] reflec_concat = xr.concat(reproj_reflectivity_list, dim='time') standardize_attr(reflec_concat, frame_type=FrameType.dBZ, zero_value=9999.) # Rover motion = rover(reflec_concat) rover_time = pd.Timestamp.now() # Semi Lagrangian Advection reflectivity = sla( reflec_concat, motion, 30 ) sla_time = pd.Timestamp.now() .. GENERATED FROM PYTHON SOURCE LINES 152-158 Concatenating observed and forecasted reflectivities ------------------------------------------------------- 1. Add forecasted reflectivity to reproj_reflectivity_list. 2. Concatenate observed and forecasted reflectivity xarray.DataArrays along the time dimension. .. GENERATED FROM PYTHON SOURCE LINES 158-165 .. code-block:: default reflectivity = xr.concat([reflec_concat[:-1, ...], reflectivity], dim='time') reflectivity.attrs['long_name'] = 'Reflectivity' standardize_attr(reflectivity) concat_time = pd.Timestamp.now() .. GENERATED FROM PYTHON SOURCE LINES 166-174 Generating radar reflectivity maps ----------------------------------- Define the color scale and format of the plots and plot using xarray.plot(). In this example, only hourly images will be plotted. .. GENERATED FROM PYTHON SOURCE LINES 174-266 .. code-block:: default # Defining colour scale and format levels = [ -32768, 10, 15, 20, 24, 28, 32, 34, 38, 41, 44, 47, 50, 53, 56, 58, 60, 62 ] cmap = ListedColormap([ '#FFFFFF', '#08C5F5', '#0091F3', '#3898FF', '#008243', '#00A433', '#00D100', '#01F508', '#77FF00', '#E0D100', '#FFDC01', '#EEB200', '#F08100', '#F00101', '#E20200', '#B40466', '#ED02F0' ]) norm = BoundaryNorm(levels, ncolors=cmap.N, clip=True) # Defining the crs crs = area_def_tgt.to_cartopy_crs() # Generating a timelist for every hour timelist = [ (basetime + pd.Timedelta(60*i-6, 'm')) for i in range(4) ] # Obtaining the slice of the xarray to be plotted da_plot = reflectivity.sel(time=timelist) # Defining motion quivers qx = motion.coords['easting'].values[::5] qy = motion.coords['northing'].values[::5] qu = motion.values[0, ::5, ::5] qv = motion.values[1, ::5, ::5] # Defining coastlines map_shape_file = os.path.join(THIS_DIR, "./../tests/samples/shape/rsmc") ocean_color = np.array([[[178, 208, 254]]], dtype=np.uint8) land_color = cfeature.COLORS['land'] coastline = cfeature.ShapelyFeature( list(shpreader.Reader(map_shape_file).geometries()), ccrs.PlateCarree() ) # Plotting p = da_plot.plot( col='time', col_wrap=2, subplot_kws={'projection': crs}, cbar_kwargs={ 'extend': 'max', 'ticks': levels[1:], 'format': '%.3g' }, cmap=cmap, norm=norm ) for idx, ax in enumerate(p.axes.flat): # ocean ax.imshow(np.tile(ocean_color, [2, 2, 1]), origin='upper', transform=ccrs.PlateCarree(), extent=[-180, 180, -180, 180], zorder=-1) # coastline, color ax.add_feature(coastline, facecolor=land_color, edgecolor='none', zorder=0) # overlay coastline without color ax.add_feature(coastline, facecolor='none', edgecolor='gray', linewidth=0.5, zorder=3) ax.quiver(qx, qy, qu, qv, pivot='mid', regrid_shape=20) ax.gridlines() ax.set_title( "Reflectivity\n" f"Based @ {basetime.strftime('%H:%MH')}", loc='left', fontsize=9 ) ax.set_title( '' ) ax.set_title( f"{basetime.strftime('%Y-%m-%d')} \n" f"Valid @ {timelist[idx].strftime('%H:%MH')} ", loc='right', fontsize=9 ) plt.savefig( THIS_DIR + f"/../tests/outputs/rover-output-map-hk.png", dpi=300 ) radar_image_time = pd.Timestamp.now() .. GENERATED FROM PYTHON SOURCE LINES 267-276 Accumulating hourly rainfall for 3-hour forecast ------------------------------------------------ Hourly accumulated rainfall is calculated every 30 minutes, the first endtime is the basetime i.e. T+0min. #. Convert reflectivity in dBZ to rainfalls in 6 mins with to_rainfall_depth(). #. Changing time coordinates of xarray from start time to endtime. #. Accumulate hourly rainfall every 30 minutes using multiple_acc(). .. GENERATED FROM PYTHON SOURCE LINES 276-296 .. code-block:: default # Convert reflectivity to rainrates rainfalls = to_rainfall_depth(reflectivity, a=58.53, b=1.56) # Converting the coordinates of xarray from start to endtime rainfalls.coords['time'] = [ pd.Timestamp(t) + pd.Timedelta(6, 'm') for t in rainfalls.coords['time'].values ] # Accumulate hourly rainfall every 30 minutes acc_rf = acc_rainfall_depth( rainfalls, basetime, basetime + pd.Timedelta(hours=3) ) acc_rf.attrs['long_name'] = 'Rainfall accumulated over the past 60 minutes' acc_time = pd.Timestamp.now() .. GENERATED FROM PYTHON SOURCE LINES 297-304 Plotting rainfall maps --------------------------------------- Define the colour scheme and format and plot using xarray.plot(). In this example, only hourly images will be plotted. .. GENERATED FROM PYTHON SOURCE LINES 304-390 .. code-block:: default # Defining the colour scheme levels = [ 0, 0.5, 2, 5, 10, 20, 30, 40, 50, 70, 100, 150, 200, 300, 400, 500, 600, 700 ] cmap = ListedColormap([ '#ffffff', '#9bf7f7', '#00ffff', '#00d5cc', '#00bd3d', '#2fd646', '#9de843', '#ffdd41', '#ffac33', '#ff621e', '#d23211', '#9d0063', '#e300ae', '#ff00ce', '#ff57da', '#ff8de6', '#ffe4fd' ]) norm = BoundaryNorm(levels, ncolors=cmap.N, clip=True) # Defining projection crs = area_def_tgt.to_cartopy_crs() # Defining zoom extent r = 64000 proj_site = acc_rf.proj_site zoom = ( proj_site[0]-r, proj_site[0]+r, proj_site[1]-r, proj_site[1]+r ) # (x0, x1, y0, y1) # Defining times for plotting timelist = [basetime + pd.Timedelta(i, 'h') for i in range(4)] # Obtaining xarray slice to be plotted da_plot = acc_rf.sel( easting=slice(zoom[0], zoom[1]), northing=slice(zoom[3], zoom[2]), time=timelist ) # Plotting p = da_plot.plot( col='time', col_wrap=2, subplot_kws={'projection': crs}, cbar_kwargs={ 'extend': 'max', 'ticks': levels, 'format': '%.3g' }, cmap=cmap, norm=norm ) for idx, ax in enumerate(p.axes.flat): # ocean ax.imshow(np.tile(ocean_color, [2, 2, 1]), origin='upper', transform=ccrs.PlateCarree(), extent=[-180, 180, -180, 180], zorder=-1) # coastline, color ax.add_feature(coastline, facecolor=land_color, edgecolor='none', zorder=0) # overlay coastline without color ax.add_feature(coastline, facecolor='none', edgecolor='gray', linewidth=0.5, zorder=3) ax.gridlines() ax.set_xlim(zoom[0], zoom[1]) ax.set_ylim(zoom[2], zoom[3]) ax.set_title( "Past Hour Rainfall\n" f"Based @ {basetime.strftime('%H:%MH')}", loc='left', fontsize=8 ) ax.set_title( '' ) ax.set_title( f"{basetime.strftime('%Y-%m-%d')} \n" f"Valid @ {timelist[idx].strftime('%H:%MH')} ", loc='right', fontsize=8 ) plt.savefig( THIS_DIR + f"/../tests/outputs/rainfall_hk.png", dpi=300 ) rf_image_time = pd.Timestamp.now() .. GENERATED FROM PYTHON SOURCE LINES 391-403 Extract the rainfall values at a specified location ------------------------------------------------------------------ In this example, the rainfall values at the location is assumed to be the same as the nearest gridpoint. 1. Read information regarding the rain gauge stations into a pandas.DataFrame. 2. Extract the rainfall values at the nearest gridpoint to location for given times (in this example, 30 minute intervals). 3. Store rainfall values over time in a pandas.DataFrame. 4. Plot the time series of rainfall at different stations. .. GENERATED FROM PYTHON SOURCE LINES 403-445 .. code-block:: default # Getting rain gauge station coordinates df = pd.read_csv( os.path.join(THIS_DIR, "../tests/samples/hk_raingauge.csv"), usecols=[0, 1, 2, 3, 4] ) # Extract rainfall values at gridpoint closest to the # location specified for given timesteps and storing it # in pandas.DataFrame. rf_time = [] for time in acc_rf.coords['time'].values: rf = [] for index, row in df.iterrows(): rf.append(acc_rf.sel( time=time, northing=row[1], easting=row[2], method='nearest' ).values) rf_time.append(rf) rf_time = np.array(rf_time) station_rf = pd.DataFrame( data=rf_time, columns=df.iloc[:, 0], index=pd.Index( acc_rf.coords['time'].values, name='time' ) ) print(station_rf) # Plotting time series graph ax = station_rf.plot(title="Time Series of Hourly Accumulated Rainfall", grid=True) ax.set_ylabel("Hourly Accumulated Rainfall (mm)") plt.savefig(THIS_DIR+"/../tests/outputs/qpf_time_series.png") extract_time = pd.Timestamp.now() .. GENERATED FROM PYTHON SOURCE LINES 446-449 Checking run time of each component -------------------------------------------------------------------- .. GENERATED FROM PYTHON SOURCE LINES 449-468 .. code-block:: default print(f"Start time: {start_time}") print(f"Initialising time: {initialising_time}") print(f"Rover time: {rover_time}") print(f"SLA time: {sla_time}") print(f"Concatenating time: {concat_time}") print(f"Plotting radar image time: {radar_image_time}") print(f"Accumulating rainfall time: {acc_time}") print(f"Plotting rainfall map time: {rf_image_time}") print(f"Extracting and plotting time series time: {extract_time}") print(f"Time to initialise: {initialising_time-start_time}") print(f"Time to run rover: {rover_time-initialising_time}") print(f"Time to perform SLA: {sla_time-rover_time}") print(f"Time to concatenate xarrays: {concat_time - sla_time}") print(f"Time to plot radar image: {radar_image_time - concat_time}") print(f"Time to accumulate rainfall: {acc_time - radar_image_time}") print(f"Time to plot rainfall maps: {rf_image_time-acc_time}") print(f"Time to extract and plot time series: {extract_time-rf_image_time}") .. rst-class:: sphx-glr-timing **Total running time of the script:** ( 0 minutes 0.008 seconds) .. _sphx_glr_download_auto_examples_qpf_hk.py: .. only:: html .. container:: sphx-glr-footer sphx-glr-footer-example .. container:: sphx-glr-download sphx-glr-download-python :download:`Download Python source code: qpf_hk.py ` .. container:: sphx-glr-download sphx-glr-download-jupyter :download:`Download Jupyter notebook: qpf_hk.ipynb ` .. only:: html .. rst-class:: sphx-glr-signature `Gallery generated by Sphinx-Gallery `_